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Database Methods

The data warehouse is implemented in a heterogeneous operating system environment running on a variety of networked 32 bit and 64 bit AMD Opteron and Intel based computers. Database servers run Windows Server 2008 Enterprise Edition x64 [3] or Windows Server 2003 Enterprise Edition x64; file servers run Red Hat Fedora Core Linux [1]. All servers are accessed from both Windows XP [2] and Red Hat Linux clients. Database servers run SQL Server 2005 Enterprise x64 Edition [4] or SQL Server 2008 Enterprise x64 Edition and use components from SQL and Analysis Services. For details regarding our database, see Simms et al. [5]; Kehl et al. [6]; and Simms and Daggett [7].

Reference List

  1. Fedora Core Red Hat.
  2. Microsoft Corporation Windows XP Professional Microsoft Corporation.
  3. Microsoft Corporation Windows 2003 Server Enterprise X64 Edition Microsoft Corporation.
  4. Microsoft Corporation SQL Server 2005 Enterprise X64 Edition Microsoft Corporation: 2005.
  5. Simms AM, Toofanny RD, Kehl C, Benson NC, and Daggett V. Dynameomics: design of a computational lab workflow and scientific data repository for protein simulations. Protein Engineering Design & Selection, 21: 369-377, 2008.
  6. Kehl C, Simms AM, Toofanny RD, and Daggett V. A. Dynameomics: a multi-dimensional analysis-optimized database for dynamic protein data. Protein Engineering Design & Selection, 21: 379-386, 2008.
  7. Simms A.M. and Daggett V. Protein simulation data in the relational model. The Journal of Supercomputing, 62:150-173, 2012. [DOI]